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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61473551_61474176_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61473551 - 61474176

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAG|GCAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GGGATGACCACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCGCAT

U12 Branch Point Sequence:

TTTCCCCGCATG

Flanking Amino Acid:

ETQGTPYSQLVDIKKMVAAW

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.3

1.16

0.7

93.2

21.3

Major BPS

-0.1

1.4

56.9

40.5

Major PPT

52.8

0.06

1.1

42.1

Minor 5ss

-2.4

3.8

41.8

44.8

Minor BPS

44.5

-0.5

2.2

58.68

42.9

Associated Gene:

Gene:

TRIM9

Ensembl Gene ID:

ENSAPLG00000016305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045198

61451873 - 61479330

27458

ENSAPLT00000031985

61451672 - 61477616

25945