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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61474201_61474890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61474201 - 61474890

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGACT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCCAGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTGCCTTTCATC

Flanking Amino Acid:

QLVDIKKMVAAWFSFDPSSA

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

76.3

39.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

73.7

0.53

0.8

28.6

Minor 5ss

33.8

-1.8

3.4

49.6

46.4

Minor BPS

49.7

-0

1.7

58.79

41.2

Associated Gene:

Gene:

TRIM9

Ensembl Gene ID:

ENSAPLG00000016305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045198

61451873 - 61479330

27458

ENSAPLT00000031985

61451672 - 61477616

25945