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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61476110_61476349_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61476110 - 61476349

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAC

U12 Branch Point Sequence:

AGGTTCAAACCC

Flanking Amino Acid:

PAVSLNRNVQLSALLNGTER

Intron Amino Acid Position:

772

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

67.4

0.43

73.2

28.9

Major PPT

65.3

0.35

63.3

31.8

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

41.3

-0.6

49.64

40.8

Associated Gene:

Gene:

TRIM9

Ensembl Gene ID:

ENSAPLG00000016305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031985

61451672 - 61477616

25945