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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61476110_61477612_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61476110 - 61477612

Intron Length:

1503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CATCTCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

CAGTTCTGAGGC

Flanking Amino Acid:

PAVSLNRNVQVTLHTGLPVP

Intron Amino Acid Position:

776

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

75.8

0.58

0.9

36.7

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

-0.5

1.9

47.58

42.1

Associated Gene:

Gene:

TRIM9

Ensembl Gene ID:

ENSAPLG00000016305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045198

61451873 - 61479330

27458