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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61476400_61477612_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61476400 - 61477612

Intron Length:

1213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTATTTCCA

5'SS Class:

major

3'SS Sequence:

CATCTCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

CAGTTCTGAGGC

Flanking Amino Acid:

GTERQLPGPVR*

Intron Amino Acid Position:

788

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.7

0.39

1.1

57.4

41.3

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

75.8

0.58

0.9

36.7

Minor 5ss

41.1

-1

2.7

51.6

44.8

Minor BPS

-0.5

1.9

47.58

42.1

Associated Gene:

Gene:

TRIM9

Ensembl Gene ID:

ENSAPLG00000016305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031985

61451672 - 61477616

25945