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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6148014_6148452_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6148014 - 6148452

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGACTT

5'SS Class:

major

3'SS Sequence:

CTCTCTCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GATTTTTTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

70.9

39.1

Major BPS

87.3

0.93

0.8

36.5

Major PPT

81.9

0.72

0.7

25.3

Minor 5ss

45.7

-0.5

3.1

65.8

39.4

Minor BPS

75.4

0.79

1.1

76.85

33.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017408

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025075

6143299 - 6148979

5681