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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61484294_61484468_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61484294 - 61484468

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGGCGTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTCCAC

U12 Branch Point Sequence:

TGCTCCACGAGC

Flanking Amino Acid:

LGNGGLGRLAACFLDSMATL

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

29.3

Major BPS

44.9

-0.3

1.4

52.1

43.1

Major PPT

62.4

0.28

1.1

57.1

43.3

Minor 5ss

26.1

-2.7

2.9

29.9

43.2

Minor BPS

44.1

-0.4

2.1

55.9

42.5

Associated Gene:

Gene:

PYGL

Ensembl Gene ID:

ENSAPLG00000016327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036948

61481031 - 61489379

8349

ENSAPLT00000017060

61481031 - 61489515

8485