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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61490027_61490323_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61490027 - 61490323

Intron Length:

297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CGTCTCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTTAT

U12 Branch Point Sequence:

CGAGGTTTATTG

Flanking Amino Acid:

SSNPELPALVKDFLNMK*

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

77.7

30.1

Major BPS

63.5

0.34

1.4

57.4

49.1

Major PPT

75.5

0.57

0.9

68.7

37.2

Minor 5ss

31.6

-2.1

3.2

41.8

38.8

Minor BPS

39.4

-0.9

1.9

35.72

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002445

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002463

61489879 - 61493886

4008