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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6149493_6150065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6149493 - 6150065

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

GAACTCTTAACG

Flanking Amino Acid:

AIKLLGEIKETLLSFLLPGH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

77.1

0.67

77.9

32.2

Major PPT

86.2

0.81

0.8

84.1

30.8

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

0.27

1.4

59.93

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026679

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042276

6144191 - 6152162

7972