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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61506774_61510239_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61506774 - 61510239

Intron Length:

3466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCCG

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TTTTTTTCCACA

Flanking Amino Acid:

TLLQDNLLGRVHFDQFKEAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.1

57.9

46.7

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

91.4

0.93

0.6

87.9

22.3

Minor 5ss

30.6

-2.2

3.2

31.8

42.1

Minor BPS

55.3

0.16

74.67

37.4

Associated Gene:

Gene:

NIN

Ensembl Gene ID:

ENSAPLG00000002459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036840

61506570 - 61554952

48383

ENSAPLT00000018978

61506570 - 61554952

48383

ENSAPLT00000002506

61506570 - 61550419

43850

ENSAPLT00000046156

61506570 - 61547097

40528