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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61514792_61519767_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61514792 - 61519767

Intron Length:

4976

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

ATAATAACAACC

Flanking Amino Acid:

LHVTPGGCEEHWKTRGSEEY

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

70.1

0.5

70.3

31.9

Major PPT

81.5

0.71

0.8

73.7

36.9

Minor 5ss

38.4

-1.3

3.3

55.8

48.4

Minor BPS

41.9

-0.6

1.9

53.26

37.1

Associated Gene:

Gene:

NIN

Ensembl Gene ID:

ENSAPLG00000002459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046156

61506570 - 61547097

40528

ENSAPLT00000036840

61506570 - 61554952

48383

ENSAPLT00000018978

61506570 - 61554952

48383

ENSAPLT00000002506

61506570 - 61550419

43850