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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61522714_61523961_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61522714 - 61523961

Intron Length:

1248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCAGC

5'SS Class:

major

3'SS Sequence:

TGTTGTTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCAAC

U12 Branch Point Sequence:

TCTGCTCCAACA

Flanking Amino Acid:

GVENSQDILKALDFSLDEKV

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

67.1

44.6

Major BPS

49.8

-0

1.2

34.3

Major PPT

78.6

0.64

0.9

73.2

37.2

Minor 5ss

45.3

-0.5

2.7

61.2

43.3

Minor BPS

48.4

-0.1

63.87

42.8

Associated Gene:

Gene:

NIN

Ensembl Gene ID:

ENSAPLG00000002459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036840

61506570 - 61554952

48383

ENSAPLT00000018978

61506570 - 61554952

48383

ENSAPLT00000002506

61506570 - 61550419

43850

ENSAPLT00000046156

61506570 - 61547097

40528