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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61524099_61525037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61524099 - 61525037

Intron Length:

939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTCGC

5'SS Class:

major

3'SS Sequence:

GTGTTCACCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

GCTGCCTTAACC

Flanking Amino Acid:

ASFKTEIRHLLERVDQVARE

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.1

60.4

44.5

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

64.6

0.33

0.9

56.1

Minor 5ss

37.5

-1.4

54.6

42.5

Minor BPS

74.1

0.74

1.4

75.04

41.8

Associated Gene:

Gene:

NIN

Ensembl Gene ID:

ENSAPLG00000002459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018978

61506570 - 61554952

48383

ENSAPLT00000002506

61506570 - 61550419

43850

ENSAPLT00000046156

61506570 - 61547097

40528

ENSAPLT00000036840

61506570 - 61554952

48383