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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61525179_61525743_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61525179 - 61525743

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTGT

5'SS Class:

major

3'SS Sequence:

GATGCCTTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

GATGCCTTACCA

Flanking Amino Acid:

AIERRNEYNLRKLDEEYKER

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

63.7

43.1

Major BPS

0.85

0.9

39.9

Major PPT

64.7

0.33

55.6

44.2

Minor 5ss

36.4

-1.5

3.7

55.4

48.8

Minor BPS

61.1

0.34

1.8

69.3

42.8

Associated Gene:

Gene:

NIN

Ensembl Gene ID:

ENSAPLG00000002459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036840

61506570 - 61554952

48383

ENSAPLT00000018978

61506570 - 61554952

48383

ENSAPLT00000002506

61506570 - 61550419

43850

ENSAPLT00000046156

61506570 - 61547097

40528