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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61526819_61527582_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61526819 - 61527582

Intron Length:

764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGTA

5'SS Class:

strong_major

3'SS Sequence:

GATGCCGTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GTCCTGTTGATG

Flanking Amino Acid:

RNLENVLAEKYGDLDPSSAE

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

83.9

27.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

67.8

0.4

62.1

Minor 5ss

35.6

-1.6

3.4

47.2

Minor BPS

44.2

-0.6

47.61

40.2

Associated Gene:

Gene:

NIN

Ensembl Gene ID:

ENSAPLG00000002459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036840

61506570 - 61554952

48383

ENSAPLT00000018978

61506570 - 61554952

48383

ENSAPLT00000002506

61506570 - 61550419

43850

ENSAPLT00000046156

61506570 - 61547097

40528