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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61531205_61531948_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61531205 - 61531948

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TAACCATGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

ATTATGTTAACC

Flanking Amino Acid:

RKHKQELEEERKKMEIDYNR

Intron Amino Acid Position:

813

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

84.7

0.86

74.3

40.7

Major PPT

62.1

0.27

59.2

41.4

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

58.7

0.25

2.1

73.08

37.8

Associated Gene:

Gene:

NIN

Ensembl Gene ID:

ENSAPLG00000002459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046156

61506570 - 61547097

40528

ENSAPLT00000018978

61506570 - 61554952

48383

ENSAPLT00000002506

61506570 - 61550419

43850