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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61536022_61537045_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61536022 - 61537045

Intron Length:

1024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCACTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

ATAGTCATAACT

Flanking Amino Acid:

QKMVDNLKKQVADLKTRNQQ

Intron Amino Acid Position:

1567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

0.67

1.1

77.7

37.1

Major PPT

75.2

0.57

0.9

34.5

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

58.6

0.35

1.7

75.93

40.4

Associated Gene:

Gene:

NIN

Ensembl Gene ID:

ENSAPLG00000002459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036840

61506570 - 61554952

48383

ENSAPLT00000018978

61506570 - 61554952

48383

ENSAPLT00000002506

61506570 - 61550419

43850

ENSAPLT00000046156

61506570 - 61547097

40528