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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61539263_61539783_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61539263 - 61539783

Intron Length:

521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

AATCTTATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

GTAATCTTATTT

Flanking Amino Acid:

SEELNRCIDKVAKVSFLENA

Intron Amino Acid Position:

1718

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

76.9

33.7

Major BPS

82.6

0.81

0.8

71.7

Major PPT

78.3

0.64

0.9

74.8

38.9

Minor 5ss

31.3

-2.1

38.6

46.4

Minor BPS

55.4

0.25

1.6

70.03

Associated Gene:

Gene:

NIN

Ensembl Gene ID:

ENSAPLG00000002459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002506

61506570 - 61550419

43850

ENSAPLT00000046156

61506570 - 61547097

40528

ENSAPLT00000036840

61506570 - 61554952

48383

ENSAPLT00000018978

61506570 - 61554952

48383