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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61540747_61541859_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61540747 - 61541859

Intron Length:

1113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGTCTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

TAAGGCCTAACC

Flanking Amino Acid:

HKQLQNANEKNRVLERAVPS

Intron Amino Acid Position:

1805

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.1

70.6

41.4

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

68.9

0.43

1.1

71.8

38.4

Minor 5ss

38.6

-1.3

3.2

44.2

Minor BPS

47.5

-0.2

2.2

61.25

43.5

Associated Gene:

Gene:

NIN

Ensembl Gene ID:

ENSAPLG00000002459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046156

61506570 - 61547097

40528

ENSAPLT00000036840

61506570 - 61554952

48383

ENSAPLT00000018978

61506570 - 61554952

48383

ENSAPLT00000002506

61506570 - 61550419

43850