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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61543412_61544554_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61543412 - 61544554

Intron Length:

1143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGTTT

5'SS Class:

major

3'SS Sequence:

CTAACCTGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TCATGGCTAACC

Flanking Amino Acid:

QVKLDDQLMESSVVGTSREG

Intron Amino Acid Position:

1941

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

72.5

39.4

Major BPS

84.8

0.86

85.7

34.9

Major PPT

62.9

0.29

54.4

41.1

Minor 5ss

41.7

-0.9

3.6

64.7

46.6

Minor BPS

43.4

-0.5

2.6

59.56

45.3

Associated Gene:

Gene:

NIN

Ensembl Gene ID:

ENSAPLG00000002459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046156

61506570 - 61547097

40528