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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61547258_61552805_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61547258 - 61552805

Intron Length:

5548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCCC

5'SS Class:

major

3'SS Sequence:

TGTTGCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TCATCGTTAACT

Flanking Amino Acid:

SRPSETNMQQGGHEQLLKMM

Intron Amino Acid Position:

2005

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

63.8

40.7

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

82.5

0.73

0.9

73.4

41.9

Minor 5ss

31.4

-2.1

3.3

42.6

44.4

Minor BPS

68.7

0.66

2.1

84.67

41.9

Associated Gene:

Gene:

NIN

Ensembl Gene ID:

ENSAPLG00000002459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036840

61506570 - 61554952

48383

ENSAPLT00000018978

61506570 - 61554952

48383