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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61552920_61554022_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61552920 - 61554022

Intron Length:

1103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

ATTCACAATTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GTTTCATTCACA

Flanking Amino Acid:

QDKVNQLKEQLSKNTKADAM

Intron Amino Acid Position:

2043

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

84.6

33.2

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

68.5

0.42

64.3

40.8

Minor 5ss

-0.3

2.9

67.1

37.8

Minor BPS

61.9

0.37

77.59

38.9

Associated Gene:

Gene:

NIN

Ensembl Gene ID:

ENSAPLG00000002459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036840

61506570 - 61554952

48383

ENSAPLT00000018978

61506570 - 61554952

48383