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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61560866_61568850_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61560866 - 61568850

Intron Length:

7985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

TTTGGCTAAACG

Flanking Amino Acid:

MSQNHGRHTSGIGRVAATSL

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.08

0.7

85.2

32.2

Major BPS

74.8

0.62

1.1

40.5

Major PPT

75.7

0.58

0.9

76.7

Minor 5ss

36.3

-1.6

3.3

48.7

47.5

Minor BPS

51.4

-0.1

2.3

66.67

47.1

Associated Gene:

Gene:

SAV1

Ensembl Gene ID:

ENSAPLG00000003206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039834

61559251 - 61577970

18720

ENSAPLT00000003261

61557269 - 61577116

19848