Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_61569122_61569951_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61569122 - 61569951

Intron Length:

830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCATACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

CCTTCCTTCATA

Flanking Amino Acid:

RAQYKHPCAPSVPRYDQPPP

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

73.4

37.3

Major BPS

0.62

1.1

77.2

Major PPT

81.3

0.71

0.8

76.5

31.1

Minor 5ss

39.7

-1.2

3.1

48.1

Minor BPS

0.44

1.8

70.44

42.7

Associated Gene:

Gene:

SAV1

Ensembl Gene ID:

ENSAPLG00000003206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039834

61559251 - 61577970

18720

ENSAPLT00000003261

61557269 - 61577116

19848