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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61578116_61580245_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61578116 - 61580245

Intron Length:

2130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCAGCAT

U12 Branch Point Sequence:

CTGTCAGCATCT

Flanking Amino Acid:

ALWDQGSTNEALYKLYSAAA

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.3

1.04

0.8

79.7

35.4

Major BPS

50.7

0.02

1.5

44.2

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

-1.9

3.2

43.9

Minor BPS

39.8

-0.7

2.4

61.01

48.3

Associated Gene:

Gene:

ATL1

Ensembl Gene ID:

ENSAPLG00000003351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035489

61578005 - 61603936

25932

ENSAPLT00000033362

61578005 - 61602624

24620