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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61584471_61586356_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61584471 - 61586356

Intron Length:

1886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGAGGC

5'SS Class:

major

3'SS Sequence:

GGTTTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGGTTCTGATGA

Flanking Amino Acid:

TNPNFDGKLKEIDDEFIKNL

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

64.4

40.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

82.4

0.73

0.9

73.4

41.9

Minor 5ss

29.7

-2.3

3.5

41.9

44.9

Minor BPS

45.6

-0.3

1.9

56.28

42.9

Associated Gene:

Gene:

ATL1

Ensembl Gene ID:

ENSAPLG00000003351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033362

61578005 - 61602624

24620

ENSAPLT00000003451

61578005 - 61603936

25932

ENSAPLT00000035632

61579745 - 61603936

24192

ENSAPLT00000035489

61578005 - 61603936

25932