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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61586496_61587111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61586496 - 61587111

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTCGTTCT

5'SS Class:

major

3'SS Sequence:

CGATCTCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TGACCCCAAACC

Flanking Amino Acid:

GAKFLEKRLKVSGNQHEELQ

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

73.7

37.7

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

71.6

0.49

0.9

65.2

35.9

Minor 5ss

38.1

-1.3

2.9

51.7

44.7

Minor BPS

48.6

-0.1

62.79

41.8

Associated Gene:

Gene:

ATL1

Ensembl Gene ID:

ENSAPLG00000003351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035632

61579745 - 61603936

24192

ENSAPLT00000033362

61578005 - 61602624

24620