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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61593495_61593855_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61593495 - 61593855

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCACCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

TTGTTCCCACCT

Flanking Amino Acid:

DFMLRYMYNKEAVDWVGDYN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

76.9

0.61

0.8

70.2

29.5

Minor 5ss

40.5

-1.1

3.3

55.3

48.9

Minor BPS

47.3

-0.1

2.1

72.37

44.5

Associated Gene:

Gene:

ATL1

Ensembl Gene ID:

ENSAPLG00000003351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003451

61578005 - 61603936

25932

ENSAPLT00000035632

61579745 - 61603936

24192

ENSAPLT00000035489

61578005 - 61603936

25932

ENSAPLT00000033362

61578005 - 61602624

24620