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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61594104_61603902_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61594104 - 61603902

Intron Length:

9799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGAGGC

5'SS Class:

major

3'SS Sequence:

GCTGTTTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAG

U12 Branch Point Sequence:

AGGAACCAAACT

Flanking Amino Acid:

ARNRRERSSWGSFAEKTYEW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

56.7

41.9

Major BPS

51.1

0.03

1.8

71.4

45.1

Major PPT

69.9

0.45

65.2

41.2

Minor 5ss

28.9

-2.4

3.5

32.4

42.6

Minor BPS

42.2

-0.5

2.1

58.03

Associated Gene:

Gene:

ATL1

Ensembl Gene ID:

ENSAPLG00000003351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035632

61579745 - 61603936

24192

ENSAPLT00000035489

61578005 - 61603936

25932

ENSAPLT00000003451

61578005 - 61603936

25932