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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61606170_61607689_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61606170 - 61607689

Intron Length:

1520

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAGATTCT

5'SS Class:

strong_major

3'SS Sequence:

CCAAGCACACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

CTTTTCAGCACT

Flanking Amino Acid:

GGNPRNKLGTAPRPRYLSVQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.73

72.7

38.1

Major BPS

0.65

1.5

85.7

34.9

Major PPT

51.4

0.03

37.8

Minor 5ss

30.5

-2.2

4.2

49.9

46.5

Minor BPS

47.3

-0.1

2.2

73.17

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044023

61606039 - 61608554

2516