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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6163122_6164008_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6163122 - 6164008

Intron Length:

887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

CCACCCTTCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

ATTTGTGTATTC

Flanking Amino Acid:

VNVSENLPRQVINEVWQEQT

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

69.8

0.45

0.8

60.6

34.9

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

42.9

-0.5

2.4

59.67

40.6

Associated Gene:

Gene:

DEPDC7

Ensembl Gene ID:

ENSAPLG00000006814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007090

6159412 - 6168018

8607