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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61720124_61730463_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61720124 - 61730463

Intron Length:

10340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCCC

5'SS Class:

major

3'SS Sequence:

TTCTTTTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AATTTTTTAAAT

Flanking Amino Acid:

RGLFVPALRKVQQQVHPNLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.3

70.1

38.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

76.8

0.6

75.5

38.4

Minor 5ss

30.9

-2.2

2.7

37.3

39.8

Minor BPS

0.71

1.3

80.49

34.7

Associated Gene:

Gene:

SOS2

Ensembl Gene ID:

ENSAPLG00000005327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045409

61720037 - 61770848

50812

ENSAPLT00000019197

61720037 - 61771636

51600

ENSAPLT00000005524

61720037 - 61770848

50812