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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61730590_61733462_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61730590 - 61733462

Intron Length:

2873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TGTTCCTTATGT

Flanking Amino Acid:

AQPRTVQDVEERVQKTFPHP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

85.7

0.89

0.8

22.2

Major PPT

0.41

1.1

64.7

45.5

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

66.4

0.59

1.9

84.73

41.8

Associated Gene:

Gene:

SOS2

Ensembl Gene ID:

ENSAPLG00000005327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019197

61720037 - 61771636

51600

ENSAPLT00000005524

61720037 - 61770848

50812

ENSAPLT00000045409

61720037 - 61770848

50812