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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61760603_61761541_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61760603 - 61761541

Intron Length:

939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGGTC

5'SS Class:

major

3'SS Sequence:

TTTATCATAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTTATCATAACA

Flanking Amino Acid:

QLTLLESDLYRAVQPSELVG

Intron Amino Acid Position:

794

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

67.8

37.4

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

75.8

0.58

71.1

38.3

Minor 5ss

31.7

-2.1

48.7

47.8

Minor BPS

68.1

0.56

1.6

81.01

33.9

Associated Gene:

Gene:

SOS2

Ensembl Gene ID:

ENSAPLG00000005327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031553

61734432 - 61771636

37205

ENSAPLT00000019197

61720037 - 61771636

51600

ENSAPLT00000005524

61720037 - 61770848

50812

ENSAPLT00000045409

61720037 - 61770848

50812

ENSAPLT00000035802

61733451 - 61772100

38650