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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61766047_61767526_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61766047 - 61767526

Intron Length:

1480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

TTTATTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

CCAGCTTTATTT

Flanking Amino Acid:

PRNCKQPPRFPRKTTYPLKS

Intron Amino Acid Position:

1025

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

76.5

38.6

Major BPS

76.8

0.67

0.9

75.9

Major PPT

90.5

0.91

0.7

89.1

27.7

Minor 5ss

42.7

-0.8

3.1

65.3

39.9

Minor BPS

48.6

-0

1.7

59.48

44.9

Associated Gene:

Gene:

SOS2

Ensembl Gene ID:

ENSAPLG00000005327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031553

61734432 - 61771636

37205

ENSAPLT00000019197

61720037 - 61771636

51600

ENSAPLT00000005524

61720037 - 61770848

50812

ENSAPLT00000045409

61720037 - 61770848

50812

ENSAPLT00000035802

61733451 - 61772100

38650