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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61770007_61770338_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61770007 - 61770338

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATTTT

5'SS Class:

strong_major

3'SS Sequence:

CATAATGTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

TCTCTCATAATG

Flanking Amino Acid:

KMDQDASNAKGSLKSDDDPP

Intron Amino Acid Position:

1149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

82.9

29.9

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

60.9

0.25

54.1

40.7

Minor 5ss

55.6

0.19

2.5

75.5

40.6

Minor BPS

54.7

0.01

1.7

61.17

41.1

Associated Gene:

Gene:

SOS2

Ensembl Gene ID:

ENSAPLG00000005327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031553

61734432 - 61771636

37205

ENSAPLT00000019197

61720037 - 61771636

51600

ENSAPLT00000005524

61720037 - 61770848

50812

ENSAPLT00000045409

61720037 - 61770848

50812

ENSAPLT00000035802

61733451 - 61772100

38650