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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61776255_61776421_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61776255 - 61776421

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCGGA

5'SS Class:

major

3'SS Sequence:

GTGTGTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTGAC

U12 Branch Point Sequence:

GTGAGGTGACCC

Flanking Amino Acid:

GAVGIMAATLGANVTVTDLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

59.4

41.8

Major BPS

48.9

-0

1.3

40.5

41.4

Major PPT

68.2

0.41

61.8

44.4

Minor 5ss

29.8

-2.3

3.2

43.5

Minor BPS

35.1

-1.1

2.4

44.36

43.4

Associated Gene:

Gene:

VCPKMT

Ensembl Gene ID:

ENSAPLG00000005825

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039011

61775859 - 61779191

3333

ENSAPLT00000038363

61773556 - 61779191

5636

ENSAPLT00000027553

61775796 - 61779191

3396

ENSAPLT00000006018

61775640 - 61779191

3552