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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61776533_61776705_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61776533 - 61776705

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTTGTATG

5'SS Class:

major

3'SS Sequence:

CTTCTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CAGCGCTCACCT

Flanking Amino Acid:

TGSVRAKVLKWGEDVTEFQP

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.2

68.3

42.1

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

88.5

0.87

0.6

88.2

21.6

Minor 5ss

41.9

-0.9

2.5

49.4

40.9

Minor BPS

41.5

-0.5

2.1

54.56

46.7

Associated Gene:

Gene:

VCPKMT

Ensembl Gene ID:

ENSAPLG00000005825

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039011

61775859 - 61779191

3333

ENSAPLT00000038363

61773556 - 61779191

5636

ENSAPLT00000027553

61775796 - 61779191

3396

ENSAPLT00000006018

61775640 - 61779191

3552