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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61777829_61779077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61777829 - 61779077

Intron Length:

1249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTATAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

CCTCTTATAACA

Flanking Amino Acid:

NPEIERRYFELLQADFELEK

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

79.1

0.72

69.3

38.4

Major PPT

73.9

0.54

0.9

69.5

34.1

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

50.7

0.02

1.6

60.68

39.7

Associated Gene:

Gene:

VCPKMT

Ensembl Gene ID:

ENSAPLG00000005825

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039011

61775859 - 61779191

3333

ENSAPLT00000038363

61773556 - 61779191

5636

ENSAPLT00000027553

61775796 - 61779191

3396

ENSAPLT00000006018

61775640 - 61779191

3552