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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61816649_61818114_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61816649 - 61818114

Intron Length:

1466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

CATGTTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

TTTCTCTTATCT

Flanking Amino Acid:

LQTNHITMLLRNPYVLSEEE

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

80.5

33.9

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

79.2

0.66

0.8

77.2

36.8

Minor 5ss

30.6

-2.2

2.5

34.1

41.4

Minor BPS

72.3

0.78

1.5

89.15

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006159

61813214 - 61829719

16506