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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61818301_61818790_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61818301 - 61818790

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TAATCATAAACA

Flanking Amino Acid:

LSLSAYANAKKYYDHKRHAA

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

76.2

39.3

Major BPS

80.4

0.76

80.3

31.8

Major PPT

91.7

0.94

0.6

87.8

22.3

Minor 5ss

38.4

-1.3

3.6

56.8

41.8

Minor BPS

57.9

0.24

1.9

71.06

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006159

61813214 - 61829719

16506