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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61824977_61825413_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61824977 - 61825413

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGTTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTCAC

U12 Branch Point Sequence:

GCGCCGTCACCC

Flanking Amino Acid:

GRRHLSAKERREMKKKKQQN

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

1.2

54.6

40.8

Major PPT

77.1

0.61

0.8

76.1

32.5

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

38.8

-0.8

2.3

44.46

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006159

61813214 - 61829719

16506