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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61830468_61830755_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61830468 - 61830755

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TCCATGTTAACA

Flanking Amino Acid:

VFSLQPRSLVRLCLEAVICF

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

77.3

0.68

81.5

Major PPT

65.8

0.36

63.8

31.7

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

50.5

0.01

2.1

62.91

43.8

Associated Gene:

Gene:

KLHDC2

Ensembl Gene ID:

ENSAPLG00000006886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047132

61830344 - 61842270

11927

ENSAPLT00000007194

61830344 - 61841777

11434