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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61832495_61832944_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61832495 - 61832944

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

CTGTTTGTATTT

Flanking Amino Acid:

GGFTTDKQPLSDAWIYCISK

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

80.7

33.7

Major BPS

0.72

78.4

31.2

Major PPT

81.1

0.7

0.9

72.5

42.4

Minor 5ss

37.6

-1.4

50.5

Minor BPS

44.6

-0.3

2.1

61.91

43.6

Associated Gene:

Gene:

KLHDC2

Ensembl Gene ID:

ENSAPLG00000006886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047132

61830344 - 61842270

11927

ENSAPLT00000007194

61830344 - 61841777

11434