Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_61833443_61833519_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61833443 - 61833519

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCCC

5'SS Class:

major

3'SS Sequence:

TGTTTTATTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

AGAATTTCAACC

Flanking Amino Acid:

RGFVFGGRYRESRMNDLYYL

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.1

63.5

41.4

Major BPS

0.79

0.8

83.7

25.7

Major PPT

82.6

0.73

0.8

78.4

34.8

Minor 5ss

36.8

-1.5

2.9

42.7

37.7

Minor BPS

48.9

-0.1

1.5

55.31

36.2

Associated Gene:

Gene:

KLHDC2

Ensembl Gene ID:

ENSAPLG00000006886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047132

61830344 - 61842270

11927

ENSAPLT00000007194

61830344 - 61841777

11434