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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61836104_61837995_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61836104 - 61837995

Intron Length:

1892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGCTC

5'SS Class:

major

3'SS Sequence:

TCTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

ATATTTCTAACA

Flanking Amino Acid:

DKLGVWVYKNKLIFFGGYGY

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.6

39.9

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

93.5

0.98

0.6

92.3

18.1

Minor 5ss

-1.5

3.5

51.2

39.7

Minor BPS

60.4

0.32

1.6

70.95

34.7

Associated Gene:

Gene:

KLHDC2

Ensembl Gene ID:

ENSAPLG00000006886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047132

61830344 - 61842270

11927

ENSAPLT00000007194

61830344 - 61841777

11434