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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61839561_61841609_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61839561 - 61841609

Intron Length:

2049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

ACTGTGCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATATTTTAAACT

Flanking Amino Acid:

GAACTSGEATRKKSKTEGDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

68.6

0.42

0.9

58.7

42.5

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

63.3

0.5

1.6

78.4

38.1

Associated Gene:

Gene:

KLHDC2

Ensembl Gene ID:

ENSAPLG00000006886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047132

61830344 - 61842270

11927