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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61864176_61865019_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61864176 - 61865019

Intron Length:

844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATTGTAT

5'SS Class:

weak_major

3'SS Sequence:

TTTTTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TTATACTGAGAA

Flanking Amino Acid:

GFDDKGYSNRLYYVNLRTKN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.1

61.1

39.9

Major BPS

76.3

0.65

67.3

39.3

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

44.1

-0.6

3.2

55.2

Minor BPS

47.7

-0.1

1.9

64.28

Associated Gene:

Gene:

KLHDC1

Ensembl Gene ID:

ENSAPLG00000007007

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007290

61842444 - 61870544

28101