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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6187210_6189425_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6187210 - 6189425

Intron Length:

2216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTAT

5'SS Class:

major

3'SS Sequence:

CATAATATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTGTCCATAATA

Flanking Amino Acid:

KPRSKPVQSARTIHCKPSGS

Intron Amino Acid Position:

1529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

70.2

36.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

70.6

0.46

62.7

42.3

Minor 5ss

44.6

-0.6

3.2

64.1

47.4

Minor BPS

71.8

0.68

1.6

80.32

35.7

Associated Gene:

Gene:

QSER1

Ensembl Gene ID:

ENSAPLG00000006676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041591

6183838 - 6203866

20029

ENSAPLT00000039527

6180704 - 6202816

22113

ENSAPLT00000006932

6183838 - 6208618

24781