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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61879059_61880939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61879059 - 61880939

Intron Length:

1881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGCTTTGAATT

Flanking Amino Acid:

KVIDAVEKQPLSSNMIELST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

32.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

42.9

-0.8

2.8

60.8

37.7

Minor BPS

54.3

0.21

1.4

37.2

Associated Gene:

Gene:

POLE2

Ensembl Gene ID:

ENSAPLG00000007393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007757

61877379 - 61896398

19020